Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.27■□□□□ 0.2
LSP1P33241 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LSP1P33241 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
LSP1P33241 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.27■□□□□ 0.2
LSP1P33241 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.27■□□□□ 0.2
LSP1P33241 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 AC011467.2-201ENST00000598425 242 ntBASIC16.27■□□□□ 0.2
LSP1P33241 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.27■□□□□ 0.2
LSP1P33241 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 AC148477.4-201ENST00000613430 1793 ntBASIC16.27■□□□□ 0.2
LSP1P33241 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LSP1P33241 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
LSP1P33241 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.27■□□□□ 0.19
LSP1P33241 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LSP1P33241 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
LSP1P33241 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.27■□□□□ 0.19
LSP1P33241 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LSP1P33241 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LSP1P33241 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LSP1P33241 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LSP1P33241 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LSP1P33241 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.27■□□□□ 0.19
LSP1P33241 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LSP1P33241 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LSP1P33241 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LSP1P33241 AL161772.1-201ENST00000610494 4412 ntBASIC16.27■□□□□ 0.19
LSP1P33241 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.27■□□□□ 0.19
LSP1P33241 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 AC005252.3-201ENST00000623855 2258 ntBASIC16.26■□□□□ 0.19
LSP1P33241 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
LSP1P33241 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
LSP1P33241 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.26■□□□□ 0.19
LSP1P33241 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.26■□□□□ 0.19
LSP1P33241 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.26■□□□□ 0.19
LSP1P33241 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
LSP1P33241 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.26■□□□□ 0.19
LSP1P33241 CYP2A7P1-201ENST00000595391 815 ntBASIC16.26■□□□□ 0.19
LSP1P33241 AC012306.2-201ENST00000609350 630 ntBASIC16.26■□□□□ 0.19
LSP1P33241 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.26■□□□□ 0.19
LSP1P33241 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LSP1P33241 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LSP1P33241 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LSP1P33241 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.25■□□□□ 0.19
LSP1P33241 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LSP1P33241 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 AC009090.5-201ENST00000624886 2285 ntBASIC16.25■□□□□ 0.19
LSP1P33241 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.25■□□□□ 0.19
LSP1P33241 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
LSP1P33241 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.25■□□□□ 0.19
LSP1P33241 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.25■□□□□ 0.19
LSP1P33241 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
LSP1P33241 VENTXP5-201ENST00000523979 775 ntBASIC16.25■□□□□ 0.19
LSP1P33241 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.25■□□□□ 0.19
LSP1P33241 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.25■□□□□ 0.19
LSP1P33241 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.25■□□□□ 0.19
LSP1P33241 AL592071.1-201ENST00000611956 408 ntBASIC16.25■□□□□ 0.19
LSP1P33241 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.25■□□□□ 0.19
LSP1P33241 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.25■□□□□ 0.19
LSP1P33241 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.25■□□□□ 0.19
LSP1P33241 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms