Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.8■□□□□ 0.44
SMPD1P17405 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SMPD1P17405 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 INTS4P2-202ENST00000614726 2019 ntBASIC17.8■□□□□ 0.44
SMPD1P17405 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 REXO1L1P-202ENST00000608646 1974 ntBASIC17.8■□□□□ 0.44
SMPD1P17405 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.8■□□□□ 0.44
SMPD1P17405 AP001282.1-201ENST00000531301 1499 ntBASIC17.8■□□□□ 0.44
SMPD1P17405 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.79■□□□□ 0.44
SMPD1P17405 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.79■□□□□ 0.44
SMPD1P17405 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.79■□□□□ 0.44
SMPD1P17405 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.79■□□□□ 0.44
SMPD1P17405 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SMPD1P17405 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SMPD1P17405 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.79■□□□□ 0.44
SMPD1P17405 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.79■□□□□ 0.44
SMPD1P17405 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 HAUS4P1-201ENST00000406739 1145 ntBASIC17.79■□□□□ 0.44
SMPD1P17405 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.79■□□□□ 0.44
SMPD1P17405 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SMPD1P17405 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.79■□□□□ 0.44
SMPD1P17405 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.79■□□□□ 0.44
SMPD1P17405 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.79■□□□□ 0.44
SMPD1P17405 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.79■□□□□ 0.44
SMPD1P17405 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.79■□□□□ 0.44
SMPD1P17405 ENPP7P5-201ENST00000541031 1031 ntBASIC17.79■□□□□ 0.44
SMPD1P17405 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 HNRNPUP1-201ENST00000554987 333 ntBASIC17.79■□□□□ 0.44
SMPD1P17405 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SMPD1P17405 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.79■□□□□ 0.44
SMPD1P17405 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.79■□□□□ 0.44
SMPD1P17405 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SMPD1P17405 FLJ38576-201ENST00000623820 2459 ntBASIC17.79■□□□□ 0.44
SMPD1P17405 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SMPD1P17405 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.79■□□□□ 0.44
SMPD1P17405 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SMPD1P17405 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.79■□□□□ 0.44
SMPD1P17405 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMPD1P17405 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.79■□□□□ 0.44
SMPD1P17405 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SMPD1P17405 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SMPD1P17405 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.78■□□□□ 0.44
SMPD1P17405 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.78■□□□□ 0.44
SMPD1P17405 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.78■□□□□ 0.44
SMPD1P17405 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SMPD1P17405 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 AC099336.1-201ENST00000417053 1171 ntBASIC17.78■□□□□ 0.44
SMPD1P17405 AC136604.1-201ENST00000418535 575 ntBASIC17.78■□□□□ 0.44
SMPD1P17405 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.78■□□□□ 0.44
SMPD1P17405 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.78■□□□□ 0.44
SMPD1P17405 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.78■□□□□ 0.44
SMPD1P17405 AP001889.1-201ENST00000525414 633 ntBASIC17.78■□□□□ 0.44
SMPD1P17405 AL583810.1-201ENST00000553344 1045 ntBASIC17.78■□□□□ 0.44
SMPD1P17405 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.78■□□□□ 0.44
SMPD1P17405 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.78■□□□□ 0.44
SMPD1P17405 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.78■□□□□ 0.44
SMPD1P17405 MIR4538-201ENST00000581377 78 ntBASIC17.78■□□□□ 0.44
SMPD1P17405 AL049840.4-201ENST00000602422 811 ntBASIC17.78■□□□□ 0.44
SMPD1P17405 AL450472.2-201ENST00000603663 1156 ntBASIC17.78■□□□□ 0.44
SMPD1P17405 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.78■□□□□ 0.44
SMPD1P17405 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.78■□□□□ 0.44
SMPD1P17405 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SMPD1P17405 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms