Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.14■□□□□ 0.01
CCL4P13236 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL4P13236 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.14■□□□□ 0.01
CCL4P13236 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL4P13236 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL4P13236 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.14■□□□□ 0.01
CCL4P13236 AL033527.4-201ENST00000641026 673 ntBASIC15.14■□□□□ 0.01
CCL4P13236 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 KRT8P22-201ENST00000562317 1415 ntBASIC15.14■□□□□ 0.01
CCL4P13236 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL4P13236 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL4P13236 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCL4P13236 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
CCL4P13236 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCL4P13236 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCL4P13236 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL4P13236 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCL4P13236 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL4P13236 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCL4P13236 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL4P13236 RNF165-205ENST00000588679 2904 ntBASIC15.13■□□□□ 0.01
CCL4P13236 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 AC018665.1-201ENST00000622927 1362 ntBASIC15.13■□□□□ 0.01
CCL4P13236 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL4P13236 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL4P13236 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL4P13236 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL4P13236 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL4P13236 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL4P13236 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL4P13236 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL4P13236 KRT18P64-201ENST00000434946 1219 ntBASIC15.13■□□□□ 0.01
CCL4P13236 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCL4P13236 FAM86LP-201ENST00000478302 853 ntBASIC15.13■□□□□ 0.01
CCL4P13236 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CCL4P13236 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CCL4P13236 AC104989.1-201ENST00000519711 778 ntBASIC15.13■□□□□ 0.01
CCL4P13236 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL4P13236 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 SLC25A47P1-201ENST00000531577 414 ntBASIC15.13■□□□□ 0.01
CCL4P13236 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCL4P13236 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL4P13236 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.13■□□□□ 0.01
CCL4P13236 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL4P13236 AC133539.2-201ENST00000604757 467 ntBASIC15.13■□□□□ 0.01
CCL4P13236 CU634019.7-201ENST00000624153 1185 ntBASIC15.13■□□□□ 0.01
CCL4P13236 FP236241.2-201ENST00000624906 1185 ntBASIC15.13■□□□□ 0.01
CCL4P13236 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCL4P13236 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 AC106886.4-201ENST00000623557 2502 ntBASIC15.13■□□□□ 0.01
CCL4P13236 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL4P13236 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCL4P13236 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL4P13236 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCL4P13236 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL4P13236 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL4P13236 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCL4P13236 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCL4P13236 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.12■□□□□ 0.01
CCL4P13236 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL4P13236 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL4P13236 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CCL4P13236 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL4P13236 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms