Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.72■□□□□ 0.59
CALM3P0DP25 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.72■□□□□ 0.59
CALM3P0DP25 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.72■□□□□ 0.59
CALM3P0DP25 AL158211.3-201ENST00000607385 239 ntBASIC18.72■□□□□ 0.59
CALM3P0DP25 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CALM3P0DP25 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.72■□□□□ 0.59
CALM3P0DP25 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CALM3P0DP25 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALM3P0DP25 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CALM3P0DP25 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALM3P0DP25 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CALM3P0DP25 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CALM3P0DP25 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALM3P0DP25 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALM3P0DP25 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.72■□□□□ 0.59
CALM3P0DP25 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALM3P0DP25 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALM3P0DP25 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CALM3P0DP25 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CALM3P0DP25 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CALM3P0DP25 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CALM3P0DP25 FO538757.1-201ENST00000623083 1397 ntBASIC18.71■□□□□ 0.59
CALM3P0DP25 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.71■□□□□ 0.59
CALM3P0DP25 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CALM3P0DP25 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CALM3P0DP25 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 FO393414.2-201ENST00000405153 598 ntBASIC18.71■□□□□ 0.59
CALM3P0DP25 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.71■□□□□ 0.59
CALM3P0DP25 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.71■□□□□ 0.59
CALM3P0DP25 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CALM3P0DP25 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.71■□□□□ 0.59
CALM3P0DP25 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.71■□□□□ 0.59
CALM3P0DP25 AC073592.8-201ENST00000624126 511 ntBASIC18.71■□□□□ 0.59
CALM3P0DP25 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CALM3P0DP25 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CALM3P0DP25 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CALM3P0DP25 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CALM3P0DP25 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.71■□□□□ 0.59
CALM3P0DP25 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALM3P0DP25 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALM3P0DP25 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CALM3P0DP25 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALM3P0DP25 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CALM3P0DP25 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CALM3P0DP25 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.7■□□□□ 0.58
CALM3P0DP25 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALM3P0DP25 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALM3P0DP25 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.7■□□□□ 0.58
CALM3P0DP25 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.7■□□□□ 0.58
CALM3P0DP25 RFPL4AP1-201ENST00000530883 850 ntBASIC18.7■□□□□ 0.58
CALM3P0DP25 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALM3P0DP25 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALM3P0DP25 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.7■□□□□ 0.58
CALM3P0DP25 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALM3P0DP25 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.7■□□□□ 0.58
CALM3P0DP25 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CALM3P0DP25 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CALM3P0DP25 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CALM3P0DP25 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALM3P0DP25 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.69■□□□□ 0.58
CALM3P0DP25 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.69■□□□□ 0.58
CALM3P0DP25 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CALM3P0DP25 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CALM3P0DP25 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.69■□□□□ 0.58
CALM3P0DP25 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALM3P0DP25 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALM3P0DP25 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CALM3P0DP25 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALM3P0DP25 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CALM3P0DP25 AL080243.2-201ENST00000418783 582 ntBASIC18.69■□□□□ 0.58
CALM3P0DP25 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.69■□□□□ 0.58
CALM3P0DP25 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.69■□□□□ 0.58
CALM3P0DP25 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.69■□□□□ 0.58
CALM3P0DP25 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.69■□□□□ 0.58
CALM3P0DP25 SPDYE12P-201ENST00000618416 771 ntBASIC18.69■□□□□ 0.58
CALM3P0DP25 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALM3P0DP25 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALM3P0DP25 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALM3P0DP25 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALM3P0DP25 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALM3P0DP25 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms