Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 AC236430.1-201ENST00000402231 743 ntBASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 AC239800.4-201ENST00000603712 296 ntBASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCNYL3P0C7X3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 AC241585.1-201ENST00000433527 519 ntBASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 PRYP6-201ENST00000514804 343 ntBASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 AC027369.6-201ENST00000525520 931 ntBASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 RARRES2P9-201ENST00000565168 469 ntBASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 AP3S2-216ENST00000617003 1561 ntBASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNYL3P0C7X3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms