Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 SPDYE18-201ENST00000510091 1050 ntBASIC18.05■□□□□ 0.48
CYP3A4P08684 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CYP3A4P08684 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.05■□□□□ 0.48
CYP3A4P08684 SRD5A3P1-201ENST00000603021 949 ntBASIC18.05■□□□□ 0.48
CYP3A4P08684 AC004790.1-201ENST00000612686 536 ntBASIC18.05■□□□□ 0.48
CYP3A4P08684 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.05■□□□□ 0.48
CYP3A4P08684 AL391005.1-201ENST00000623953 2435 ntBASIC18.05■□□□□ 0.48
CYP3A4P08684 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.05■□□□□ 0.48
CYP3A4P08684 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CYP3A4P08684 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CYP3A4P08684 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CYP3A4P08684 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CYP3A4P08684 AC026691.1-201ENST00000602502 2017 ntBASIC18.05■□□□□ 0.48
CYP3A4P08684 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CYP3A4P08684 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CYP3A4P08684 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.04■□□□□ 0.48
CYP3A4P08684 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CYP3A4P08684 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.04■□□□□ 0.48
CYP3A4P08684 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.04■□□□□ 0.48
CYP3A4P08684 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.04■□□□□ 0.48
CYP3A4P08684 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.04■□□□□ 0.48
CYP3A4P08684 RPL13P2-201ENST00000440687 659 ntBASIC18.04■□□□□ 0.48
CYP3A4P08684 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CYP3A4P08684 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.04■□□□□ 0.48
CYP3A4P08684 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.04■□□□□ 0.48
CYP3A4P08684 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.04■□□□□ 0.48
CYP3A4P08684 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.04■□□□□ 0.48
CYP3A4P08684 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CYP3A4P08684 AC138761.1-201ENST00000584393 385 ntBASIC18.04■□□□□ 0.48
CYP3A4P08684 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CYP3A4P08684 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 AC018892.3-201ENST00000623986 2499 ntBASIC18.04■□□□□ 0.48
CYP3A4P08684 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYP3A4P08684 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CYP3A4P08684 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CYP3A4P08684 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CYP3A4P08684 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.03■□□□□ 0.48
CYP3A4P08684 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.03■□□□□ 0.48
CYP3A4P08684 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CYP3A4P08684 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.03■□□□□ 0.48
CYP3A4P08684 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.03■□□□□ 0.48
CYP3A4P08684 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.03■□□□□ 0.48
CYP3A4P08684 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.03■□□□□ 0.48
CYP3A4P08684 TERF1P3-201ENST00000505638 1227 ntBASIC18.03■□□□□ 0.48
CYP3A4P08684 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.03■□□□□ 0.48
CYP3A4P08684 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.03■□□□□ 0.48
CYP3A4P08684 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.03■□□□□ 0.48
CYP3A4P08684 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.03■□□□□ 0.48
CYP3A4P08684 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.03■□□□□ 0.48
CYP3A4P08684 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CYP3A4P08684 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CYP3A4P08684 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CYP3A4P08684 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CYP3A4P08684 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CYP3A4P08684 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CYP3A4P08684 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CYP3A4P08684 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
CYP3A4P08684 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CYP3A4P08684 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CYP3A4P08684 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CYP3A4P08684 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
CYP3A4P08684 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms