Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SFTPBP07988 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.14□□□□□ -0.15
SFTPBP07988 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SFTPBP07988 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SFTPBP07988 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.14□□□□□ -0.15
SFTPBP07988 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SFTPBP07988 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SFTPBP07988 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.14□□□□□ -0.15
SFTPBP07988 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SFTPBP07988 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SFTPBP07988 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SFTPBP07988 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SFTPBP07988 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.14□□□□□ -0.15
SFTPBP07988 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SFTPBP07988 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SFTPBP07988 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.14□□□□□ -0.15
SFTPBP07988 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.14□□□□□ -0.15
SFTPBP07988 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.14□□□□□ -0.15
SFTPBP07988 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SFTPBP07988 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SFTPBP07988 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
SFTPBP07988 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.13□□□□□ -0.15
SFTPBP07988 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SFTPBP07988 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
SFTPBP07988 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.13□□□□□ -0.15
SFTPBP07988 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SFTPBP07988 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
SFTPBP07988 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 PCGF3-213ENST00000620529 1899 ntBASIC14.13□□□□□ -0.15
SFTPBP07988 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SFTPBP07988 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SFTPBP07988 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.13□□□□□ -0.15
SFTPBP07988 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SFTPBP07988 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.13□□□□□ -0.15
SFTPBP07988 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
SFTPBP07988 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.13□□□□□ -0.15
SFTPBP07988 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.13□□□□□ -0.15
SFTPBP07988 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.13□□□□□ -0.15
SFTPBP07988 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.13□□□□□ -0.15
SFTPBP07988 RNA5SP416-201ENST00000516838 111 ntBASIC14.13□□□□□ -0.15
SFTPBP07988 PGAM5P1-201ENST00000518923 814 ntBASIC14.13□□□□□ -0.15
SFTPBP07988 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.13□□□□□ -0.15
SFTPBP07988 AC092865.5-201ENST00000545435 363 ntBASIC14.13□□□□□ -0.15
SFTPBP07988 AC005412.3-201ENST00000580309 715 ntBASIC14.13□□□□□ -0.15
SFTPBP07988 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.13□□□□□ -0.15
SFTPBP07988 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.13□□□□□ -0.15
SFTPBP07988 AC064836.3-201ENST00000607928 673 ntBASIC14.13□□□□□ -0.15
SFTPBP07988 AC004790.2-201ENST00000623588 572 ntBASIC14.13□□□□□ -0.15
SFTPBP07988 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.13□□□□□ -0.15
SFTPBP07988 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SFTPBP07988 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.13□□□□□ -0.15
SFTPBP07988 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.13□□□□□ -0.15
SFTPBP07988 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.13□□□□□ -0.15
SFTPBP07988 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.13□□□□□ -0.15
SFTPBP07988 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.13□□□□□ -0.15
SFTPBP07988 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTPBP07988 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.12□□□□□ -0.15
SFTPBP07988 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.12□□□□□ -0.15
SFTPBP07988 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.12□□□□□ -0.15
SFTPBP07988 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.12□□□□□ -0.15
SFTPBP07988 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SFTPBP07988 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTPBP07988 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms