Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CSF1RP07333 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CSF1RP07333 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSF1RP07333 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSF1RP07333 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.66■□□□□ 0.74
CSF1RP07333 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.66■□□□□ 0.74
CSF1RP07333 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.66■□□□□ 0.74
CSF1RP07333 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.65■□□□□ 0.74
CSF1RP07333 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.65■□□□□ 0.74
CSF1RP07333 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CSF1RP07333 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
CSF1RP07333 AL662844.4-201ENST00000606367 2838 ntBASIC19.65■□□□□ 0.74
CSF1RP07333 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CSF1RP07333 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.65■□□□□ 0.74
CSF1RP07333 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.65■□□□□ 0.74
CSF1RP07333 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.65■□□□□ 0.74
CSF1RP07333 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.65■□□□□ 0.74
CSF1RP07333 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.65■□□□□ 0.74
CSF1RP07333 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.65■□□□□ 0.74
CSF1RP07333 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.65■□□□□ 0.74
CSF1RP07333 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.65■□□□□ 0.74
CSF1RP07333 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSF1RP07333 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.65■□□□□ 0.74
CSF1RP07333 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CSF1RP07333 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSF1RP07333 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSF1RP07333 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CSF1RP07333 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
CSF1RP07333 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1RP07333 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1RP07333 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CSF1RP07333 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.64■□□□□ 0.73
CSF1RP07333 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.64■□□□□ 0.73
CSF1RP07333 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.64■□□□□ 0.73
CSF1RP07333 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1RP07333 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1RP07333 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1RP07333 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1RP07333 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1RP07333 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.64■□□□□ 0.73
CSF1RP07333 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1RP07333 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1RP07333 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1RP07333 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1RP07333 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.64■□□□□ 0.73
CSF1RP07333 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CSF1RP07333 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSF1RP07333 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CSF1RP07333 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CSF1RP07333 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CSF1RP07333 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 AC069224.1-201ENST00000566372 1715 ntBASIC19.63■□□□□ 0.73
CSF1RP07333 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.63■□□□□ 0.73
CSF1RP07333 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CSF1RP07333 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CSF1RP07333 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 TMEM14DP-201ENST00000422205 345 ntBASIC19.63■□□□□ 0.73
CSF1RP07333 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.63■□□□□ 0.73
CSF1RP07333 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.63■□□□□ 0.73
CSF1RP07333 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 MIR4313-201ENST00000580760 101 ntBASIC19.63■□□□□ 0.73
CSF1RP07333 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.63■□□□□ 0.73
CSF1RP07333 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.63■□□□□ 0.73
CSF1RP07333 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.63■□□□□ 0.73
CSF1RP07333 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.63■□□□□ 0.73
CSF1RP07333 AC000095.1-201ENST00000603208 874 ntBASIC19.63■□□□□ 0.73
CSF1RP07333 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CSF1RP07333 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.63■□□□□ 0.73
CSF1RP07333 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSF1RP07333 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.63■□□□□ 0.73
CSF1RP07333 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CSF1RP07333 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CSF1RP07333 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CSF1RP07333 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CSF1RP07333 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CSF1RP07333 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms