Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC020765.3-201ENST00000613051 740 ntBASIC16.55■□□□□ 0.24
MT-ND3P03897 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND3P03897 AP001350.2-201ENST00000625104 1094 ntBASIC16.55■□□□□ 0.24
MT-ND3P03897 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND3P03897 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND3P03897 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.55■□□□□ 0.24
MT-ND3P03897 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.55■□□□□ 0.24
MT-ND3P03897 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND3P03897 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.55■□□□□ 0.24
MT-ND3P03897 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.55■□□□□ 0.24
MT-ND3P03897 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND3P03897 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND3P03897 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
MT-ND3P03897 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.55■□□□□ 0.24
MT-ND3P03897 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND3P03897 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND3P03897 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND3P03897 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MT-ND3P03897 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND3P03897 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.55■□□□□ 0.24
MT-ND3P03897 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.55■□□□□ 0.24
MT-ND3P03897 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MT-ND3P03897 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MT-ND3P03897 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MT-ND3P03897 AL353732.1-201ENST00000569618 1459 ntBASIC16.54■□□□□ 0.24
MT-ND3P03897 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND3P03897 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
MT-ND3P03897 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
MT-ND3P03897 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND3P03897 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND3P03897 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND3P03897 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.54■□□□□ 0.24
MT-ND3P03897 PTCHD3P3-201ENST00000403073 906 ntBASIC16.54■□□□□ 0.24
MT-ND3P03897 CRYGEP-201ENST00000412192 528 ntBASIC16.54■□□□□ 0.24
MT-ND3P03897 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.54■□□□□ 0.24
MT-ND3P03897 GPX1P2-201ENST00000429271 606 ntBASIC16.54■□□□□ 0.24
MT-ND3P03897 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.54■□□□□ 0.24
MT-ND3P03897 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.54■□□□□ 0.24
MT-ND3P03897 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND3P03897 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.54■□□□□ 0.24
MT-ND3P03897 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.54■□□□□ 0.24
MT-ND3P03897 AC064836.3-201ENST00000607928 673 ntBASIC16.54■□□□□ 0.24
MT-ND3P03897 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.54■□□□□ 0.24
MT-ND3P03897 AL691403.2-201ENST00000618460 490 ntBASIC16.54■□□□□ 0.24
MT-ND3P03897 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.54■□□□□ 0.24
MT-ND3P03897 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.54■□□□□ 0.24
MT-ND3P03897 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.54■□□□□ 0.24
MT-ND3P03897 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MT-ND3P03897 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
MT-ND3P03897 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
MT-ND3P03897 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND3P03897 AC013268.4-201ENST00000637413 2228 ntBASIC16.54■□□□□ 0.24
MT-ND3P03897 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MT-ND3P03897 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.54■□□□□ 0.24
MT-ND3P03897 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MT-ND3P03897 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
MT-ND3P03897 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-ND3P03897 AC092850.2-201ENST00000623821 2697 ntBASIC16.53■□□□□ 0.24
MT-ND3P03897 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-ND3P03897 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-ND3P03897 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 RPSAP43-201ENST00000402237 625 ntBASIC16.53■□□□□ 0.24
MT-ND3P03897 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.53■□□□□ 0.24
MT-ND3P03897 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.53■□□□□ 0.24
MT-ND3P03897 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.53■□□□□ 0.24
MT-ND3P03897 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-ND3P03897 AC087641.1-201ENST00000557561 1021 ntBASIC16.53■□□□□ 0.24
MT-ND3P03897 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.53■□□□□ 0.24
MT-ND3P03897 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-ND3P03897 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.53■□□□□ 0.24
MT-ND3P03897 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MT-ND3P03897 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MT-ND3P03897 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MT-ND3P03897 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms