Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 AL513523.2-202ENST00000427283 2040 ntBASIC12.5□□□□□ -0.41
TRBV12-3P01733 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.5□□□□□ -0.41
TRBV12-3P01733 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRBV12-3P01733 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.49□□□□□ -0.41
TRBV12-3P01733 AC008894.3-201ENST00000624324 3103 ntBASIC12.48□□□□□ -0.41
TRBV12-3P01733 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.48□□□□□ -0.41
TRBV12-3P01733 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TRBV12-3P01733 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.48□□□□□ -0.41
TRBV12-3P01733 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRBV12-3P01733 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRBV12-3P01733 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.48□□□□□ -0.41
TRBV12-3P01733 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRBV12-3P01733 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRBV12-3P01733 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRBV12-3P01733 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TRBV12-3P01733 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRBV12-3P01733 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRBV12-3P01733 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.48□□□□□ -0.41
TRBV12-3P01733 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.48□□□□□ -0.41
TRBV12-3P01733 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms