Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VAPBO95292 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VAPBO95292 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPBO95292 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.27■□□□□ 0.2
VAPBO95292 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
VAPBO95292 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.27■□□□□ 0.2
VAPBO95292 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.27■□□□□ 0.2
VAPBO95292 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.27■□□□□ 0.2
VAPBO95292 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.27■□□□□ 0.2
VAPBO95292 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.27■□□□□ 0.2
VAPBO95292 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.27■□□□□ 0.2
VAPBO95292 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPBO95292 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPBO95292 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
VAPBO95292 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VAPBO95292 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.27■□□□□ 0.2
VAPBO95292 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.27■□□□□ 0.2
VAPBO95292 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPBO95292 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VAPBO95292 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.27■□□□□ 0.2
VAPBO95292 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VAPBO95292 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.27■□□□□ 0.2
VAPBO95292 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPBO95292 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VAPBO95292 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.27■□□□□ 0.2
VAPBO95292 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPBO95292 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VAPBO95292 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.27■□□□□ 0.19
VAPBO95292 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.27■□□□□ 0.19
VAPBO95292 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
VAPBO95292 AC104640.1-201ENST00000562617 2109 ntBASIC16.27■□□□□ 0.19
VAPBO95292 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
VAPBO95292 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VAPBO95292 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.26■□□□□ 0.19
VAPBO95292 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VAPBO95292 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VAPBO95292 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.26■□□□□ 0.19
VAPBO95292 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
VAPBO95292 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VAPBO95292 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 AL671277.1-201ENST00000429656 993 ntBASIC16.26■□□□□ 0.19
VAPBO95292 FAM58CP-201ENST00000435741 640 ntBASIC16.26■□□□□ 0.19
VAPBO95292 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.26■□□□□ 0.19
VAPBO95292 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.26■□□□□ 0.19
VAPBO95292 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.26■□□□□ 0.19
VAPBO95292 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.26■□□□□ 0.19
VAPBO95292 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 AC092384.3-202ENST00000564646 2873 ntBASIC16.26■□□□□ 0.19
VAPBO95292 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.26■□□□□ 0.19
VAPBO95292 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.26■□□□□ 0.19
VAPBO95292 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.26■□□□□ 0.19
VAPBO95292 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
VAPBO95292 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VAPBO95292 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.26■□□□□ 0.19
VAPBO95292 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VAPBO95292 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
VAPBO95292 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VAPBO95292 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.25■□□□□ 0.19
VAPBO95292 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.25■□□□□ 0.19
VAPBO95292 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 AKAP8P1-201ENST00000434743 1349 ntBASIC16.25■□□□□ 0.19
VAPBO95292 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
VAPBO95292 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.25■□□□□ 0.19
VAPBO95292 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VAPBO95292 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.25■□□□□ 0.19
VAPBO95292 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.25■□□□□ 0.19
VAPBO95292 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.25■□□□□ 0.19
VAPBO95292 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
VAPBO95292 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.25■□□□□ 0.19
VAPBO95292 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms