Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.89■□□□□ 0.29
BEST1O76090 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.89■□□□□ 0.29
BEST1O76090 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.89■□□□□ 0.29
BEST1O76090 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
BEST1O76090 CDC14C-201ENST00000428251 1719 ntBASIC16.89■□□□□ 0.29
BEST1O76090 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.89■□□□□ 0.29
BEST1O76090 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST1O76090 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
BEST1O76090 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
BEST1O76090 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.89■□□□□ 0.29
BEST1O76090 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST1O76090 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST1O76090 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
BEST1O76090 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST1O76090 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.88■□□□□ 0.29
BEST1O76090 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 AL391005.1-201ENST00000623953 2435 ntBASIC16.88■□□□□ 0.29
BEST1O76090 AC069224.1-201ENST00000566372 1715 ntBASIC16.88■□□□□ 0.29
BEST1O76090 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST1O76090 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST1O76090 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.88■□□□□ 0.29
BEST1O76090 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST1O76090 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
BEST1O76090 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST1O76090 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
BEST1O76090 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.88■□□□□ 0.29
BEST1O76090 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.88■□□□□ 0.29
BEST1O76090 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST1O76090 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.88■□□□□ 0.29
BEST1O76090 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST1O76090 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.88■□□□□ 0.29
BEST1O76090 AC002472.2-201ENST00000442739 958 ntBASIC16.88■□□□□ 0.29
BEST1O76090 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.88■□□□□ 0.29
BEST1O76090 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.88■□□□□ 0.29
BEST1O76090 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.88■□□□□ 0.29
BEST1O76090 AC004790.1-201ENST00000612686 536 ntBASIC16.88■□□□□ 0.29
BEST1O76090 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.88■□□□□ 0.29
BEST1O76090 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
BEST1O76090 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST1O76090 REXO1L1P-202ENST00000608646 1974 ntBASIC16.88■□□□□ 0.29
BEST1O76090 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST1O76090 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 LINC02447-202ENST00000501888 2146 ntBASIC16.87■□□□□ 0.29
BEST1O76090 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.87■□□□□ 0.29
BEST1O76090 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.87■□□□□ 0.29
BEST1O76090 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.87■□□□□ 0.29
BEST1O76090 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.87■□□□□ 0.29
BEST1O76090 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.87■□□□□ 0.29
BEST1O76090 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
BEST1O76090 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BEST1O76090 DOC2GP-204ENST00000639052 2548 ntBASIC16.87■□□□□ 0.29
BEST1O76090 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
BEST1O76090 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.87■□□□□ 0.29
BEST1O76090 FO393414.2-201ENST00000405153 598 ntBASIC16.87■□□□□ 0.29
BEST1O76090 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
BEST1O76090 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.87■□□□□ 0.29
BEST1O76090 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.87■□□□□ 0.29
BEST1O76090 SERBP1P3-201ENST00000459980 809 ntBASIC16.87■□□□□ 0.29
BEST1O76090 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.87■□□□□ 0.29
BEST1O76090 SERBP1P5-201ENST00000510079 1181 ntBASIC16.87■□□□□ 0.29
BEST1O76090 SPDYE18-201ENST00000510091 1050 ntBASIC16.87■□□□□ 0.29
BEST1O76090 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.87■□□□□ 0.29
BEST1O76090 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.87■□□□□ 0.29
BEST1O76090 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.87■□□□□ 0.29
BEST1O76090 MIR3197-201ENST00000582241 73 ntBASIC16.87■□□□□ 0.29
BEST1O76090 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.87■□□□□ 0.29
BEST1O76090 LINC02560-201ENST00000596379 459 ntBASIC16.87■□□□□ 0.29
BEST1O76090 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.87■□□□□ 0.29
BEST1O76090 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms