Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRIM3O75382 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM3O75382 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM3O75382 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 HLA-A-202ENST00000376806 1854 ntBASIC15.14■□□□□ 0.01
TRIM3O75382 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.14■□□□□ 0.01
TRIM3O75382 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM3O75382 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRIM3O75382 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRIM3O75382 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM3O75382 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM3O75382 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM3O75382 AL627223.1-201ENST00000416693 442 ntBASIC15.14■□□□□ 0.01
TRIM3O75382 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM3O75382 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM3O75382 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.14■□□□□ 0.01
TRIM3O75382 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.14■□□□□ 0.01
TRIM3O75382 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRIM3O75382 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM3O75382 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM3O75382 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM3O75382 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM3O75382 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM3O75382 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM3O75382 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM3O75382 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRIM3O75382 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TRIM3O75382 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 PMS2P2-201ENST00000425039 1128 ntBASIC15.13■□□□□ 0.01
TRIM3O75382 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM3O75382 AC005237.2-201ENST00000434368 219 ntBASIC15.13■□□□□ 0.01
TRIM3O75382 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
TRIM3O75382 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
TRIM3O75382 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM3O75382 AC023141.5-201ENST00000458585 616 ntBASIC15.13■□□□□ 0.01
TRIM3O75382 AC069335.1-201ENST00000489972 472 ntBASIC15.13■□□□□ 0.01
TRIM3O75382 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.13■□□□□ 0.01
TRIM3O75382 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM3O75382 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRIM3O75382 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRIM3O75382 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
TRIM3O75382 KRT8P23-201ENST00000560090 1207 ntBASIC15.13■□□□□ 0.01
TRIM3O75382 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM3O75382 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRIM3O75382 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM3O75382 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM3O75382 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM3O75382 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TRIM3O75382 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRIM3O75382 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRIM3O75382 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM3O75382 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM3O75382 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRIM3O75382 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 AC006538.1-201ENST00000567905 1585 ntBASIC15.12■□□□□ 0.01
TRIM3O75382 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms