Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCA5O60264 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.93■□□□□ 0.78
SMARCA5O60264 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCA5O60264 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCA5O60264 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCA5O60264 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
SMARCA5O60264 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCA5O60264 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SMARCA5O60264 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SMARCA5O60264 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SMARCA5O60264 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMARCA5O60264 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SMARCA5O60264 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SMARCA5O60264 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCA5O60264 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SMARCA5O60264 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCA5O60264 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SMARCA5O60264 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCA5O60264 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCA5O60264 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.92■□□□□ 0.78
SMARCA5O60264 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCA5O60264 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCA5O60264 AL691432.1-201ENST00000596308 1422 ntBASIC19.92■□□□□ 0.78
SMARCA5O60264 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.92■□□□□ 0.78
SMARCA5O60264 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCA5O60264 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCA5O60264 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SMARCA5O60264 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 BNIP3P1-202ENST00000550043 1585 ntBASIC19.91■□□□□ 0.78
SMARCA5O60264 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.91■□□□□ 0.78
SMARCA5O60264 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.91■□□□□ 0.78
SMARCA5O60264 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
SMARCA5O60264 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 AC245100.5-201ENST00000452108 331 ntBASIC19.91■□□□□ 0.78
SMARCA5O60264 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.91■□□□□ 0.78
SMARCA5O60264 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMARCA5O60264 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.91■□□□□ 0.78
SMARCA5O60264 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.91■□□□□ 0.78
SMARCA5O60264 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.91■□□□□ 0.78
SMARCA5O60264 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SMARCA5O60264 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCA5O60264 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCA5O60264 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMARCA5O60264 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCA5O60264 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SMARCA5O60264 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SMARCA5O60264 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCA5O60264 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCA5O60264 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.9■□□□□ 0.78
SMARCA5O60264 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.9■□□□□ 0.78
SMARCA5O60264 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.9■□□□□ 0.78
SMARCA5O60264 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCA5O60264 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.89■□□□□ 0.78
SMARCA5O60264 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SMARCA5O60264 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SMARCA5O60264 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCA5O60264 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCA5O60264 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms