Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.33■□□□□ 0.2
KDELR3O43731 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDELR3O43731 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KDELR3O43731 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDELR3O43731 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.32■□□□□ 0.2
KDELR3O43731 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
KDELR3O43731 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
KDELR3O43731 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
KDELR3O43731 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.32■□□□□ 0.2
KDELR3O43731 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.32■□□□□ 0.2
KDELR3O43731 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.32■□□□□ 0.2
KDELR3O43731 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.32■□□□□ 0.2
KDELR3O43731 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.32■□□□□ 0.2
KDELR3O43731 AL512638.1-201ENST00000457493 794 ntBASIC16.32■□□□□ 0.2
KDELR3O43731 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.32■□□□□ 0.2
KDELR3O43731 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 AC004890.2-204ENST00000481968 304 ntBASIC16.32■□□□□ 0.2
KDELR3O43731 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.32■□□□□ 0.2
KDELR3O43731 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.32■□□□□ 0.2
KDELR3O43731 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.32■□□□□ 0.2
KDELR3O43731 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.32■□□□□ 0.2
KDELR3O43731 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.32■□□□□ 0.2
KDELR3O43731 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.32■□□□□ 0.2
KDELR3O43731 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
KDELR3O43731 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
KDELR3O43731 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.32■□□□□ 0.2
KDELR3O43731 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
KDELR3O43731 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.32■□□□□ 0.2
KDELR3O43731 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.32■□□□□ 0.2
KDELR3O43731 REXO1L1P-202ENST00000608646 1974 ntBASIC16.32■□□□□ 0.2
KDELR3O43731 AL844908.2-201ENST00000609461 460 ntBASIC16.32■□□□□ 0.2
KDELR3O43731 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
KDELR3O43731 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.32■□□□□ 0.2
KDELR3O43731 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
KDELR3O43731 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
KDELR3O43731 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDELR3O43731 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
KDELR3O43731 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
KDELR3O43731 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.31■□□□□ 0.2
KDELR3O43731 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.31■□□□□ 0.2
KDELR3O43731 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KDELR3O43731 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KDELR3O43731 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
KDELR3O43731 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KDELR3O43731 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.31■□□□□ 0.2
KDELR3O43731 AZGP1P1-201ENST00000411909 902 ntBASIC16.31■□□□□ 0.2
KDELR3O43731 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.31■□□□□ 0.2
KDELR3O43731 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.31■□□□□ 0.2
KDELR3O43731 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.31■□□□□ 0.2
KDELR3O43731 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.31■□□□□ 0.2
KDELR3O43731 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.31■□□□□ 0.2
KDELR3O43731 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.31■□□□□ 0.2
KDELR3O43731 AL512361.1-201ENST00000554200 418 ntBASIC16.31■□□□□ 0.2
KDELR3O43731 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
KDELR3O43731 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.31■□□□□ 0.2
KDELR3O43731 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.31■□□□□ 0.2
KDELR3O43731 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.31■□□□□ 0.2
KDELR3O43731 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KDELR3O43731 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
KDELR3O43731 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.31■□□□□ 0.2
KDELR3O43731 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDELR3O43731 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.31■□□□□ 0.2
KDELR3O43731 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.3■□□□□ 0.2
KDELR3O43731 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KDELR3O43731 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDELR3O43731 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KDELR3O43731 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.3■□□□□ 0.2
KDELR3O43731 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.3■□□□□ 0.2
KDELR3O43731 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms