Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 AL109954.1-202ENST00000564051 2148 ntBASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM49D1C9J1S8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 FLJ16779-201ENST00000612722 7638 ntBASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 AL031432.2-201ENST00000566714 459 ntBASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 AL928711.1-201ENST00000570165 459 ntBASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 TP73-AS1-207ENST00000624167 988 ntBASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM49D1C9J1S8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 AL513480.1-201ENST00000451731 511 ntBASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 AC012313.10-201ENST00000623509 926 ntBASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 AL645728.2-201ENST00000641974 660 ntBASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 AC087481.3-201ENST00000602886 1894 ntBASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM49D1C9J1S8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms