Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 SPDYE7P-202ENST00000420373 878 ntBASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 AC245100.5-201ENST00000452108 331 ntBASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 MEIS3P1-201ENST00000495167 958 ntBASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 MIR6752-201ENST00000618442 71 ntBASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 DOC2GP-204ENST00000639052 2548 ntBASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI2Q9Y5P3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 AL353705.2-201ENST00000428243 662 ntBASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 MIR4453-201ENST00000584019 89 ntBASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAI2Q9Y5P3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 OR8S1-201ENST00000310194 1080 ntBASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 MIR648-201ENST00000385046 94 ntBASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 HAUS4P1-201ENST00000406739 1145 ntBASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 AC055876.3-201ENST00000431496 288 ntBASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 AC138649.4-201ENST00000612222 287 ntBASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms