Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 PHKG1P2-201ENST00000457537 863 ntBASIC21.91■■□□□ 1.1
NINLQ9Y2I6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 AC011477.6-201ENST00000604980 1927 ntBASIC21.91■■□□□ 1.1
NINLQ9Y2I6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.91■■□□□ 1.1
NINLQ9Y2I6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 AC036164.1-201ENST00000570544 333 ntBASIC21.9■■□□□ 1.1
NINLQ9Y2I6 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 AC097359.3-201ENST00000603982 1210 ntBASIC21.9■■□□□ 1.1
NINLQ9Y2I6 TMEM261P1-201ENST00000604899 340 ntBASIC21.9■■□□□ 1.1
NINLQ9Y2I6 AL162274.1-201ENST00000617191 1098 ntBASIC21.9■■□□□ 1.1
NINLQ9Y2I6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NINLQ9Y2I6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 IGHV3-72-202ENST00000621503 303 ntBASIC21.89■■□□□ 1.1
NINLQ9Y2I6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NINLQ9Y2I6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.89■■□□□ 1.09
NINLQ9Y2I6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NINLQ9Y2I6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC21.89■■□□□ 1.09
NINLQ9Y2I6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC21.89■■□□□ 1.09
NINLQ9Y2I6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.89■■□□□ 1.09
NINLQ9Y2I6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NINLQ9Y2I6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
NINLQ9Y2I6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
NINLQ9Y2I6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NINLQ9Y2I6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 NME6-203ENST00000415644 849 ntTSL 2 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 AC098850.1-201ENST00000419919 790 ntBASIC21.88■■□□□ 1.09
NINLQ9Y2I6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 MYCLP2-201ENST00000449268 967 ntBASIC21.88■■□□□ 1.09
NINLQ9Y2I6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms