Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCDNQ9UBB6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NCDNQ9UBB6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
NCDNQ9UBB6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.99■□□□□ 0.15
NCDNQ9UBB6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCDNQ9UBB6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCDNQ9UBB6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
NCDNQ9UBB6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCDNQ9UBB6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 MPRIPP1-201ENST00000452433 1089 ntBASIC15.98■□□□□ 0.15
NCDNQ9UBB6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 AC099398.1-201ENST00000567919 2776 ntBASIC15.98■□□□□ 0.15
NCDNQ9UBB6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 AC020765.3-201ENST00000613051 740 ntBASIC15.98■□□□□ 0.15
NCDNQ9UBB6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCDNQ9UBB6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.97■□□□□ 0.15
NCDNQ9UBB6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.97■□□□□ 0.15
NCDNQ9UBB6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 AC133963.1-201ENST00000504166 1679 ntBASIC15.96■□□□□ 0.15
NCDNQ9UBB6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 FXNP2-201ENST00000411625 547 ntBASIC15.96■□□□□ 0.15
NCDNQ9UBB6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NCDNQ9UBB6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms