Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
COL20A1Q9P218 PRORSD1P-202ENST00000563365 2154 ntBASIC18.14■□□□□ 0.49
COL20A1Q9P218 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.14■□□□□ 0.49
COL20A1Q9P218 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.14■□□□□ 0.49
COL20A1Q9P218 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.14■□□□□ 0.49
COL20A1Q9P218 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
COL20A1Q9P218 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COL20A1Q9P218 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL20A1Q9P218 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.14■□□□□ 0.49
COL20A1Q9P218 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 AC098614.1-201ENST00000368528 745 ntBASIC18.13■□□□□ 0.49
COL20A1Q9P218 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 MEP1AP4-201ENST00000423244 1087 ntBASIC18.13■□□□□ 0.49
COL20A1Q9P218 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 PHKG1P2-201ENST00000457537 863 ntBASIC18.13■□□□□ 0.49
COL20A1Q9P218 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 RARRES2P5-201ENST00000564013 466 ntBASIC18.13■□□□□ 0.49
COL20A1Q9P218 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 AC097359.3-201ENST00000603982 1210 ntBASIC18.13■□□□□ 0.49
COL20A1Q9P218 AL158212.4-201ENST00000624062 1286 ntBASIC18.13■□□□□ 0.49
COL20A1Q9P218 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 AL596087.1-201ENST00000400979 1969 ntBASIC18.13■□□□□ 0.49
COL20A1Q9P218 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL20A1Q9P218 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.13■□□□□ 0.49
COL20A1Q9P218 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 CDC14C-201ENST00000428251 1719 ntBASIC18.12■□□□□ 0.49
COL20A1Q9P218 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 AP006294.1-201ENST00000415407 339 ntBASIC18.12■□□□□ 0.49
COL20A1Q9P218 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 U91328.1-201ENST00000437528 223 ntBASIC18.12■□□□□ 0.49
COL20A1Q9P218 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 AC093726.1-201ENST00000608064 963 ntBASIC18.12■□□□□ 0.49
COL20A1Q9P218 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.12■□□□□ 0.49
COL20A1Q9P218 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL20A1Q9P218 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL20A1Q9P218 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.11■□□□□ 0.49
COL20A1Q9P218 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.11■□□□□ 0.49
COL20A1Q9P218 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms