Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.32■□□□□ 0.04
VAPAQ9P0L0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.32■□□□□ 0.04
VAPAQ9P0L0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VAPAQ9P0L0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.32■□□□□ 0.04
VAPAQ9P0L0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.32■□□□□ 0.04
VAPAQ9P0L0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 AC087481.3-201ENST00000602886 1894 ntBASIC15.31■□□□□ 0.04
VAPAQ9P0L0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 RPS2P28-201ENST00000314255 741 ntBASIC15.31■□□□□ 0.04
VAPAQ9P0L0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 IGLL3P-201ENST00000412472 434 ntBASIC15.31■□□□□ 0.04
VAPAQ9P0L0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 EMBP1-201ENST00000458200 901 ntBASIC15.31■□□□□ 0.04
VAPAQ9P0L0 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.31■□□□□ 0.04
VAPAQ9P0L0 AC108751.1-201ENST00000490852 363 ntBASIC15.31■□□□□ 0.04
VAPAQ9P0L0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 AL121912.1-201ENST00000603683 238 ntBASIC15.31■□□□□ 0.04
VAPAQ9P0L0 AL365330.1-201ENST00000607459 531 ntBASIC15.31■□□□□ 0.04
VAPAQ9P0L0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPAQ9P0L0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.3■□□□□ 0.04
VAPAQ9P0L0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 AC092910.1-201ENST00000482027 1129 ntBASIC15.3■□□□□ 0.04
VAPAQ9P0L0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 AC105250.1-201ENST00000509378 2057 ntBASIC15.3■□□□□ 0.04
VAPAQ9P0L0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 AC109635.5-201ENST00000533593 962 ntBASIC15.3■□□□□ 0.04
VAPAQ9P0L0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 AC092127.1-201ENST00000567093 3455 ntBASIC15.3■□□□□ 0.04
VAPAQ9P0L0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.3■□□□□ 0.04
VAPAQ9P0L0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms