Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL591424.1-201ENST00000442569 1213 ntBASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 AC034105.1-201ENST00000563488 319 ntBASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 AC069224.1-201ENST00000566372 1715 ntBASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 AC112504.1-201ENST00000623415 1841 ntBASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 AC097376.2-205ENST00000610159 5334 ntBASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 VN2R19P-201ENST00000442399 1052 ntBASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 SLC25A6P2-201ENST00000497974 877 ntBASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 SLC25A1P1-201ENST00000528351 927 ntBASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 AC107918.2-201ENST00000530817 355 ntBASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LIN7CQ9NUP9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.5□□□□□ -0.25
LIN7CQ9NUP9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms