Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 AC021087.4-201ENST00000563761 564 ntBASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 AC040169.1-201ENST00000565382 521 ntBASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 AL353135.1-201ENST00000606729 504 ntBASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 AL592424.1-201ENST00000563624 1536 ntBASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.47■□□□□ 0.07
CCM2LQ9NUG4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 Z83851.2-201ENST00000609564 659 ntBASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 AC073592.4-201ENST00000623827 446 ntBASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.46■□□□□ 0.07
CCM2LQ9NUG4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCM2LQ9NUG4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.46■□□□□ 0.06
CCM2LQ9NUG4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCM2LQ9NUG4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCM2LQ9NUG4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCM2LQ9NUG4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCM2LQ9NUG4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
CCM2LQ9NUG4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCM2LQ9NUG4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.46■□□□□ 0.06
CCM2LQ9NUG4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CCM2LQ9NUG4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 RNA5SP415-201ENST00000517246 115 ntBASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.45■□□□□ 0.06
CCM2LQ9NUG4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms