Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 AL031731.1-201ENST00000642131 2094 ntBASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 SPDYE11-202ENST00000450699 704 ntBASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 AC243562.1-201ENST00000560672 389 ntBASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 SPDYE9P-201ENST00000570642 692 ntBASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 SPDYE10P-202ENST00000612005 668 ntBASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 SPDYE8P-202ENST00000612377 668 ntBASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 AC144831.1-201ENST00000573312 2656 ntBASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 AC022145.2-201ENST00000598203 171 ntBASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 AL513210.1-201ENST00000629608 234 ntBASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 GGT4P-201ENST00000623672 1708 ntBASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NECTIN3Q9NQS3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms