Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
GPCPD1Q9NPB8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 MIR6069-201ENST00000620069 79 ntBASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 AL109936.8-201ENST00000641772 604 ntBASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
GPCPD1Q9NPB8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 HIST3H2BA-201ENST00000436555 524 ntBASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 GNAQP1-201ENST00000444815 1067 ntBASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 AC245100.5-201ENST00000452108 331 ntBASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 SPDYE18-201ENST00000510091 1050 ntBASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 AC004233.3-201ENST00000607794 1269 ntBASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 AC009118.2-201ENST00000613275 655 ntBASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 BNIP3P1-202ENST00000550043 1585 ntBASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPCPD1Q9NPB8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms