Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 AP002414.2-201ENST00000591780 3365 ntBASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 AL133338.1-201ENST00000565695 1517 ntBASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 AC103564.2-201ENST00000432853 1299 ntBASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 GIMAP3P-201ENST00000495150 836 ntBASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC24.34■■□□□ 1.49
SCAF1Q9H7N4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCAF1Q9H7N4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SCAF1Q9H7N4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCAF1Q9H7N4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
SCAF1Q9H7N4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
SCAF1Q9H7N4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCAF1Q9H7N4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCAF1Q9H7N4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCAF1Q9H7N4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
SCAF1Q9H7N4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC24.33■■□□□ 1.49
SCAF1Q9H7N4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 AC090953.1-201ENST00000604305 1092 ntBASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 MIR6805-201ENST00000615055 62 ntBASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 AC097520.1-201ENST00000624435 385 ntBASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC24.33■■□□□ 1.48
SCAF1Q9H7N4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 KLF4P1-201ENST00000412782 1185 ntBASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 AC099522.2-201ENST00000607001 744 ntBASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCAF1Q9H7N4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 DUTP2-201ENST00000519164 463 ntBASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 FAM8A2P-201ENST00000528813 1142 ntBASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms