Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 AC005412.3-201ENST00000580309 715 ntBASIC13.18□□□□□ -0.3
RAB40CQ96S21 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 AC064862.7-201ENST00000604520 867 ntBASIC13.18□□□□□ -0.3
RAB40CQ96S21 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.18□□□□□ -0.3
RAB40CQ96S21 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 AL589182.2-201ENST00000619332 1049 ntBASIC13.18□□□□□ -0.3
RAB40CQ96S21 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
RAB40CQ96S21 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB40CQ96S21 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 LINC01101-201ENST00000622953 1884 ntBASIC13.17□□□□□ -0.3
RAB40CQ96S21 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 IGHV3-47-201ENST00000425060 335 ntBASIC13.17□□□□□ -0.3
RAB40CQ96S21 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 LINC00265-3P-201ENST00000447588 903 ntBASIC13.17□□□□□ -0.3
RAB40CQ96S21 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 TPSP2-201ENST00000561760 610 ntBASIC13.17□□□□□ -0.3
RAB40CQ96S21 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 AC093458.2-201ENST00000623150 629 ntBASIC13.17□□□□□ -0.3
RAB40CQ96S21 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms