Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LRRC3BQ96PB8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC3BQ96PB8 REXO1L1P-202ENST00000608646 1974 ntBASIC16.37■□□□□ 0.21
LRRC3BQ96PB8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 HNRNPUP1-201ENST00000554987 333 ntBASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 AC124283.3-201ENST00000570869 594 ntBASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3BQ96PB8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 AC136604.1-201ENST00000418535 575 ntBASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 AL162726.2-201ENST00000438986 1017 ntBASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 TDH-203ENST00000531764 1110 ntBASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 AC097359.3-201ENST00000603982 1210 ntBASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC3BQ96PB8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 AC018892.3-201ENST00000623986 2499 ntBASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 BOLA2P3-201ENST00000404566 256 ntBASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 BCRP2-202ENST00000447763 634 ntBASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 CTBP2P5-201ENST00000454986 1264 ntBASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 BCRP6-201ENST00000510112 632 ntBASIC16.34■□□□□ 0.21
LRRC3BQ96PB8 BCRP7-201ENST00000511549 544 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms