Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 AL390955.2-201ENST00000603032 514 ntBASIC19.25■□□□□ 0.67
DDX11Q96FC9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 AC051619.7-201ENST00000568314 623 ntBASIC19.24■□□□□ 0.67
DDX11Q96FC9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 AC020765.3-201ENST00000613051 740 ntBASIC19.24■□□□□ 0.67
DDX11Q96FC9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX11Q96FC9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX11Q96FC9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX11Q96FC9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 AC005622.1-201ENST00000636801 1703 ntBASIC19.23■□□□□ 0.67
DDX11Q96FC9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX11Q96FC9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX11Q96FC9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX11Q96FC9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX11Q96FC9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX11Q96FC9 MIR943-201ENST00000401286 94 ntBASIC19.23■□□□□ 0.67
DDX11Q96FC9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX11Q96FC9 AC055876.3-201ENST00000431496 288 ntBASIC19.23■□□□□ 0.67
DDX11Q96FC9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 KLF2P3-201ENST00000451977 1087 ntBASIC19.23■□□□□ 0.67
DDX11Q96FC9 POU5F1P6-201ENST00000466990 990 ntBASIC19.23■□□□□ 0.67
DDX11Q96FC9 INGX-202ENST00000489074 768 ntBASIC19.23■□□□□ 0.67
DDX11Q96FC9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX11Q96FC9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX11Q96FC9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 AC138649.4-201ENST00000612222 287 ntBASIC19.23■□□□□ 0.67
DDX11Q96FC9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX11Q96FC9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX11Q96FC9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX11Q96FC9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX11Q96FC9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 PMS2P4-201ENST00000412466 1052 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms