Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.96□□□□□ -0.01
CNOT9Q92600 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT9Q92600 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CNOT9Q92600 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CNOT9Q92600 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CNOT9Q92600 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CNOT9Q92600 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CNOT9Q92600 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CNOT9Q92600 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CNOT9Q92600 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CNOT9Q92600 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 PMS2P7-201ENST00000506558 1336 ntBASIC14.95□□□□□ -0.02
CNOT9Q92600 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.95□□□□□ -0.02
CNOT9Q92600 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.95□□□□□ -0.02
CNOT9Q92600 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.95□□□□□ -0.02
CNOT9Q92600 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.95□□□□□ -0.02
CNOT9Q92600 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CNOT9Q92600 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.95□□□□□ -0.02
CNOT9Q92600 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 AL671277.1-201ENST00000429656 993 ntBASIC14.95□□□□□ -0.02
CNOT9Q92600 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.95□□□□□ -0.02
CNOT9Q92600 AC040169.1-201ENST00000565382 521 ntBASIC14.95□□□□□ -0.02
CNOT9Q92600 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.95□□□□□ -0.02
CNOT9Q92600 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.95□□□□□ -0.02
CNOT9Q92600 AC092902.6-201ENST00000641783 218 ntBASIC14.95□□□□□ -0.02
CNOT9Q92600 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CNOT9Q92600 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.95□□□□□ -0.02
CNOT9Q92600 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
CNOT9Q92600 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CNOT9Q92600 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.95□□□□□ -0.02
CNOT9Q92600 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT9Q92600 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.94□□□□□ -0.02
CNOT9Q92600 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.94□□□□□ -0.02
CNOT9Q92600 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.94□□□□□ -0.02
CNOT9Q92600 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CNOT9Q92600 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CNOT9Q92600 AC068587.6-202ENST00000641839 5619 ntBASIC14.94□□□□□ -0.02
CNOT9Q92600 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CNOT9Q92600 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.94□□□□□ -0.02
CNOT9Q92600 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CNOT9Q92600 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.94□□□□□ -0.02
CNOT9Q92600 AL355306.1-201ENST00000415580 579 ntBASIC14.94□□□□□ -0.02
CNOT9Q92600 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.94□□□□□ -0.02
CNOT9Q92600 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.94□□□□□ -0.02
CNOT9Q92600 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CNOT9Q92600 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.94□□□□□ -0.02
CNOT9Q92600 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CNOT9Q92600 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.94□□□□□ -0.02
CNOT9Q92600 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CNOT9Q92600 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms