Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.08□□□□□ -0.16
CCDC107Q8WV48 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCDC107Q8WV48 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 PTCHD3P3-201ENST00000403073 906 ntBASIC14.07□□□□□ -0.16
CCDC107Q8WV48 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 LINC02447-202ENST00000501888 2146 ntBASIC14.07□□□□□ -0.16
CCDC107Q8WV48 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 AC006277.1-201ENST00000624348 1610 ntBASIC14.07□□□□□ -0.16
CCDC107Q8WV48 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 PRAL-201ENST00000624952 3286 ntBASIC14.07□□□□□ -0.16
CCDC107Q8WV48 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 CDC14C-201ENST00000428251 1719 ntBASIC14.07□□□□□ -0.16
CCDC107Q8WV48 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CCDC107Q8WV48 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC107Q8WV48 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms