Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 AL355385.1-201ENST00000606123 409 ntBASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 AC055717.3-201ENST00000622967 595 ntBASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 MTHFR-217ENST00000641820 1569 ntBASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 AC079781.4-201ENST00000641908 219 ntBASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 AC010491.1-201ENST00000563101 2797 ntBASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 UPF3AP3-201ENST00000420996 769 ntBASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 PMS2P2-201ENST00000425039 1128 ntBASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 SPCS2P4-201ENST00000436160 681 ntBASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 MKNK2P1-201ENST00000437526 628 ntBASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 TIMM8BP1-201ENST00000452384 211 ntBASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 AC079140.1-201ENST00000508039 487 ntBASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 YBX1P5-201ENST00000509441 847 ntBASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIMC1Q8NDZ2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 PRYP6-201ENST00000514804 343 ntBASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 LINC01225-203ENST00000563550 1244 ntBASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 AC026120.1-201ENST00000611536 926 ntBASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms