Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC38A9Q8NBW4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC38A9Q8NBW4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SLC38A9Q8NBW4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC38A9Q8NBW4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC38A9Q8NBW4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC38A9Q8NBW4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC38A9Q8NBW4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 AC099398.1-201ENST00000567919 2776 ntBASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 AC008494.3-201ENST00000606615 944 ntBASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 AC138969.3-201ENST00000546612 1459 ntBASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 AC138932.2-201ENST00000548268 1459 ntBASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 AC126755.4-201ENST00000549796 1459 ntBASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC38A9Q8NBW4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 CU639417.3-201ENST00000624240 1404 ntBASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 AC004987.2-201ENST00000395959 1148 ntBASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 AC087499.6-201ENST00000411576 835 ntBASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 TPRX2P-201ENST00000535362 881 ntBASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 WASH4P-201ENST00000564273 1246 ntBASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC38A9Q8NBW4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC38A9Q8NBW4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC38A9Q8NBW4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC38A9Q8NBW4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC38A9Q8NBW4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC38A9Q8NBW4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC38A9Q8NBW4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms