Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 AL353593.2-201ENST00000602529 1483 ntBASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 KRT8P10-201ENST00000450021 1447 ntBASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 AC092919.2-201ENST00000623631 1645 ntBASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 AC008677.1-201ENST00000519230 1561 ntBASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 AC003669.1-201ENST00000334569 611 ntBASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 MIR4785-201ENST00000585005 73 ntBASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 AGAP7P-201ENST00000582299 2062 ntBASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 AGAP14-201ENST00000624701 2060 ntBASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 AC091951.1-201ENST00000512854 2465 ntBASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 AJ011931.1-201ENST00000618749 2492 ntBASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CROCCP3Q8IVE0 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 INGX-201ENST00000359239 846 ntBASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 MIR648-201ENST00000385046 94 ntBASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 AC090192.1-201ENST00000517740 490 ntBASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 ZNF444P1-201ENST00000559497 298 ntBASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 AC005332.3-201ENST00000589904 676 ntBASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 AC073912.3-201ENST00000624414 853 ntBASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms