Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 PCDHA12-202ENST00000613593 2588 ntBASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 SLC25A24P2-201ENST00000415059 510 ntBASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 SDCCAG3P2-201ENST00000326105 1023 ntBASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 AC104784.1-201ENST00000473096 294 ntBASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 AC106760.1-201ENST00000508690 800 ntBASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 PTK2-225ENST00000520892 571 ntTSL 4 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 AP002490.2-201ENST00000524791 560 ntBASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 RN7SL720P-201ENST00000488178 304 ntBASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 PRKN-211ENST00000615065 261 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 TOMM22P5-201ENST00000416399 439 ntBASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 AC016700.1-201ENST00000429424 312 ntBASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 VDAC1P7-201ENST00000462417 847 ntBASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS13BQ7Z7G8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 AC004987.2-201ENST00000395959 1148 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms