Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 PCGF3-213ENST00000620529 1899 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC078925.2-201ENST00000624013 1973 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 LETM1P2-201ENST00000597330 2178 ntBASIC11.04□□□□□ -0.64
CSMD3Q7Z407 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 IMP3P2-201ENST00000489760 475 ntBASIC11.04□□□□□ -0.64
CSMD3Q7Z407 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 AC078819.1-201ENST00000547454 765 ntBASIC11.04□□□□□ -0.64
CSMD3Q7Z407 AC012085.1-201ENST00000548270 765 ntBASIC11.04□□□□□ -0.64
CSMD3Q7Z407 AP006547.1-201ENST00000563435 692 ntBASIC11.04□□□□□ -0.64
CSMD3Q7Z407 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CSMD3Q7Z407 AL592424.1-201ENST00000563624 1536 ntBASIC11.03□□□□□ -0.64
CSMD3Q7Z407 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 NF2-208ENST00000403435 2568 ntTSL 5 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms