Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 PRORSD1P-202ENST00000563365 2154 ntBASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 HAUS4P1-201ENST00000406739 1145 ntBASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 GAPDHP21-201ENST00000450301 1010 ntBASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 TPRX2P-201ENST00000535362 881 ntBASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 SLC7A15P-201ENST00000424028 1363 ntBASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.05■□□□□ 0.8
UBE3BQ7Z3V4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 WASH4P-201ENST00000564273 1246 ntBASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 AC092337.1-201ENST00000568699 1129 ntBASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 LINC01115-203ENST00000606068 577 ntBASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
UBE3BQ7Z3V4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 Z97205.2-201ENST00000564697 1639 ntBASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 DGCR5-201ENST00000399539 862 ntBASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 COX5BP8-201ENST00000416911 349 ntBASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 AC008494.3-201ENST00000606615 944 ntBASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 AL358472.5-202ENST00000641448 1267 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms