Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 PTENP1-202ENST00000532280 3996 ntBASIC14.21□□□□□ -0.13
C11orf88Q6PI97 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 AC009078.2-202ENST00000463353 338 ntBASIC14.21□□□□□ -0.13
C11orf88Q6PI97 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 SLC25A6P4-201ENST00000586535 553 ntBASIC14.21□□□□□ -0.13
C11orf88Q6PI97 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 BNIP3P18-201ENST00000593976 575 ntBASIC14.21□□□□□ -0.13
C11orf88Q6PI97 AL138831.2-201ENST00000606564 490 ntBASIC14.21□□□□□ -0.13
C11orf88Q6PI97 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 AC125634.1-201ENST00000438758 1403 ntBASIC14.21□□□□□ -0.13
C11orf88Q6PI97 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
C11orf88Q6PI97 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf88Q6PI97 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf88Q6PI97 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf88Q6PI97 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf88Q6PI97 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf88Q6PI97 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
C11orf88Q6PI97 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf88Q6PI97 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf88Q6PI97 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf88Q6PI97 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 AL603832.2-201ENST00000566195 2125 ntBASIC14.2□□□□□ -0.14
C11orf88Q6PI97 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 RPS2P28-201ENST00000314255 741 ntBASIC14.2□□□□□ -0.14
C11orf88Q6PI97 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 AC103564.2-201ENST00000432853 1299 ntBASIC14.2□□□□□ -0.14
C11orf88Q6PI97 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 HLA-J-202ENST00000469281 1241 ntBASIC14.2□□□□□ -0.14
C11orf88Q6PI97 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 AL773604.1-201ENST00000617417 272 ntBASIC14.2□□□□□ -0.14
C11orf88Q6PI97 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms