Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 IGHV3-62-201ENST00000520057 340 ntBASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 AL691432.1-201ENST00000596308 1422 ntBASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF9Q5VWM5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 RNA5SP410-201ENST00000516285 106 ntBASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 AC018892.3-201ENST00000623986 2499 ntBASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 AC011477.6-201ENST00000604980 1927 ntBASIC15.55■□□□□ 0.08
PRAMEF9Q5VWM5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 BNIP3P1-202ENST00000550043 1585 ntBASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 AC055717.3-201ENST00000622967 595 ntBASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF9Q5VWM5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF9Q5VWM5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PRAMEF9Q5VWM5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PRAMEF9Q5VWM5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PRAMEF9Q5VWM5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF9Q5VWM5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF9Q5VWM5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF9Q5VWM5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms