Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AC034105.1-201ENST00000563488 319 ntBASIC15.8■□□□□ 0.12
SGO1Q5FBB7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
SGO1Q5FBB7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGO1Q5FBB7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SGO1Q5FBB7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGO1Q5FBB7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGO1Q5FBB7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGO1Q5FBB7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGO1Q5FBB7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGO1Q5FBB7 U82695.1-201ENST00000635752 1889 ntBASIC15.8■□□□□ 0.12
SGO1Q5FBB7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGO1Q5FBB7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SGO1Q5FBB7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 IL9RP2-201ENST00000423948 1312 ntBASIC15.79■□□□□ 0.12
SGO1Q5FBB7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 MIR3909-201ENST00000579518 119 ntBASIC15.79■□□□□ 0.12
SGO1Q5FBB7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 AC016027.1-202ENST00000607927 1699 ntBASIC15.79■□□□□ 0.12
SGO1Q5FBB7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 AC092919.2-201ENST00000623631 1645 ntBASIC15.79■□□□□ 0.12
SGO1Q5FBB7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.79■□□□□ 0.12
SGO1Q5FBB7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 AL590627.1-203ENST00000421194 1026 ntBASIC15.78■□□□□ 0.12
SGO1Q5FBB7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 KRT18P34-201ENST00000488218 1270 ntBASIC15.78■□□□□ 0.12
SGO1Q5FBB7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.78■□□□□ 0.12
SGO1Q5FBB7 KRT19P2-202ENST00000557173 1012 ntBASIC15.78■□□□□ 0.12
SGO1Q5FBB7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms