Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC93Q567U6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC93Q567U6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 AC046158.3-201ENST00000624947 2558 ntBASIC19.72■□□□□ 0.75
CCDC93Q567U6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 PFN1P12-201ENST00000455938 534 ntBASIC19.72■□□□□ 0.75
CCDC93Q567U6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 AC068587.3-201ENST00000526613 355 ntBASIC19.72■□□□□ 0.75
CCDC93Q567U6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 PTP4A1P2-201ENST00000546033 454 ntBASIC19.72■□□□□ 0.75
CCDC93Q567U6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 BRI3BPP1-201ENST00000594224 787 ntBASIC19.72■□□□□ 0.75
CCDC93Q567U6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 AL645728.1-201ENST00000366221 2101 ntBASIC19.72■□□□□ 0.75
CCDC93Q567U6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC93Q567U6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC93Q567U6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC93Q567U6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC93Q567U6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC93Q567U6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 RPL13P2-201ENST00000440687 659 ntBASIC19.71■□□□□ 0.75
CCDC93Q567U6 FAM86LP-201ENST00000478302 853 ntBASIC19.71■□□□□ 0.75
CCDC93Q567U6 AP001889.1-201ENST00000525414 633 ntBASIC19.71■□□□□ 0.75
CCDC93Q567U6 AP000812.2-201ENST00000538934 718 ntBASIC19.71■□□□□ 0.75
CCDC93Q567U6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC93Q567U6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 U82695.1-201ENST00000635752 1889 ntBASIC19.71■□□□□ 0.75
CCDC93Q567U6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC93Q567U6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC93Q567U6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC93Q567U6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC93Q567U6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC93Q567U6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC93Q567U6 AC090340.1-201ENST00000620778 4980 ntBASIC19.7■□□□□ 0.74
CCDC93Q567U6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC93Q567U6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC93Q567U6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC93Q567U6 ENPP7P5-201ENST00000541031 1031 ntBASIC19.7■□□□□ 0.74
CCDC93Q567U6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms