Protein–RNA interactions for Protein: Q3BBV0

NBPF1, Neuroblastoma breakpoint family member 1, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1Q3BBV0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 CDC14C-201ENST00000428251 1719 ntBASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 MYCLP2-201ENST00000449268 967 ntBASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 INE1-201ENST00000456273 945 ntBASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 AC123567.1-201ENST00000548294 1261 ntBASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 CU639417.3-201ENST00000624240 1404 ntBASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 AC099398.1-201ENST00000567919 2776 ntBASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF1Q3BBV0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 RARRES2P5-201ENST00000564013 466 ntBASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 AL158212.4-201ENST00000624062 1286 ntBASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 CLK3P2-201ENST00000427566 1453 ntBASIC22.54■■□□□ 1.2
NBPF1Q3BBV0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 AC136604.1-201ENST00000418535 575 ntBASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 U91328.1-201ENST00000437528 223 ntBASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 MTHFR-217ENST00000641820 1569 ntBASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC22.53■■□□□ 1.2
NBPF1Q3BBV0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 AL607033.1-201ENST00000623900 1599 ntBASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 TIMM17BP1-201ENST00000545713 516 ntBASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF1Q3BBV0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms