Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC9.75□□□□□ -0.85
HSPG2P98160 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 CYP2AB1P-202ENST00000454440 1456 ntBASIC9.75□□□□□ -0.85
HSPG2P98160 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC9.75□□□□□ -0.85
HSPG2P98160 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 GCK-202ENST00000345378 2421 ntTSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC9.75□□□□□ -0.85
HSPG2P98160 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC9.75□□□□□ -0.85
HSPG2P98160 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 USP40-206ENST00000443711 628 ntTSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC9.75□□□□□ -0.85
HSPG2P98160 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
HSPG2P98160 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 MEG3_2.1-201ENST00000611456 105 ntBASIC9.75□□□□□ -0.85
HSPG2P98160 AL805961.1-203ENST00000641078 1258 ntBASIC9.75□□□□□ -0.85
HSPG2P98160 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
HSPG2P98160 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC9.75□□□□□ -0.85
HSPG2P98160 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 AC016396.2-201ENST00000562575 1417 ntBASIC9.75□□□□□ -0.85
HSPG2P98160 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
HSPG2P98160 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC9.75□□□□□ -0.85
HSPG2P98160 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 SYT17-208ENST00000568433 812 ntTSL 3 BASIC9.75□□□□□ -0.85
HSPG2P98160 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC9.75□□□□□ -0.85
HSPG2P98160 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC9.75□□□□□ -0.85
HSPG2P98160 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC9.75□□□□□ -0.85
HSPG2P98160 AP005019.2-201ENST00000615104 511 ntBASIC9.75□□□□□ -0.85
HSPG2P98160 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
HSPG2P98160 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 CAP2P1-201ENST00000557743 1390 ntBASIC9.75□□□□□ -0.85
HSPG2P98160 EML3-217ENST00000531557 2509 ntTSL 5 BASIC9.75□□□□□ -0.85
HSPG2P98160 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
HSPG2P98160 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 KRT18P43-201ENST00000469825 1281 ntBASIC9.75□□□□□ -0.85
HSPG2P98160 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 AC116345.2-201ENST00000512837 523 ntBASIC9.75□□□□□ -0.85
HSPG2P98160 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
HSPG2P98160 IFT20-206ENST00000578122 834 ntTSL 2 BASIC9.75□□□□□ -0.85
HSPG2P98160 IFT20-208ENST00000578985 831 ntTSL 3 BASIC9.75□□□□□ -0.85
HSPG2P98160 MIR4754-201ENST00000582477 89 ntBASIC9.75□□□□□ -0.85
HSPG2P98160 AL161773.1-201ENST00000624845 863 ntBASIC9.75□□□□□ -0.85
HSPG2P98160 CROCCP2-202ENST00000412962 2773 ntBASIC9.75□□□□□ -0.85
HSPG2P98160 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC9.74□□□□□ -0.85
HSPG2P98160 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 AC025271.4-201ENST00000621477 1726 ntBASIC9.74□□□□□ -0.85
HSPG2P98160 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC9.74□□□□□ -0.85
HSPG2P98160 AL118516.1-201ENST00000564152 670 ntBASIC9.74□□□□□ -0.85
HSPG2P98160 AP003392.6-201ENST00000607709 325 ntBASIC9.74□□□□□ -0.85
HSPG2P98160 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC9.74□□□□□ -0.85
HSPG2P98160 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC9.74□□□□□ -0.85
HSPG2P98160 AL138688.1-201ENST00000624851 1594 ntBASIC9.74□□□□□ -0.85
HSPG2P98160 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 VILL-207ENST00000465644 1857 ntTSL 5 BASIC9.74□□□□□ -0.85
HSPG2P98160 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 REXO1L1P-202ENST00000608646 1974 ntBASIC9.74□□□□□ -0.85
HSPG2P98160 FAU-202ENST00000434372 533 ntTSL 2 BASIC9.74□□□□□ -0.85
HSPG2P98160 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC9.74□□□□□ -0.85
HSPG2P98160 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC9.74□□□□□ -0.85
HSPG2P98160 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC9.74□□□□□ -0.85
HSPG2P98160 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC9.74□□□□□ -0.85
HSPG2P98160 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC9.74□□□□□ -0.85
HSPG2P98160 AC007881.3-201ENST00000608897 607 ntBASIC9.74□□□□□ -0.85
HSPG2P98160 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC9.74□□□□□ -0.85
HSPG2P98160 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
HSPG2P98160 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
HSPG2P98160 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC9.74□□□□□ -0.85
HSPG2P98160 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms