Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 KRT8P48-201ENST00000515599 1220 ntBASIC18.08■□□□□ 0.48
ASIC1P78348 AC243562.1-201ENST00000560672 389 ntBASIC18.08■□□□□ 0.48
ASIC1P78348 MTDHP5-201ENST00000598980 586 ntBASIC18.08■□□□□ 0.48
ASIC1P78348 AC026120.1-201ENST00000611536 926 ntBASIC18.08■□□□□ 0.48
ASIC1P78348 SPTSSB-204ENST00000617024 1292 ntBASIC18.08■□□□□ 0.48
ASIC1P78348 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ASIC1P78348 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ASIC1P78348 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ASIC1P78348 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ASIC1P78348 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.08■□□□□ 0.48
ASIC1P78348 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ASIC1P78348 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.08■□□□□ 0.48
ASIC1P78348 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.08■□□□□ 0.48
ASIC1P78348 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.08■□□□□ 0.48
ASIC1P78348 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ASIC1P78348 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ASIC1P78348 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ASIC1P78348 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.07■□□□□ 0.48
ASIC1P78348 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.07■□□□□ 0.48
ASIC1P78348 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.07■□□□□ 0.48
ASIC1P78348 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.07■□□□□ 0.48
ASIC1P78348 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.07■□□□□ 0.48
ASIC1P78348 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.07■□□□□ 0.48
ASIC1P78348 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.07■□□□□ 0.48
ASIC1P78348 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.07■□□□□ 0.48
ASIC1P78348 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 HTR5BP-201ENST00000430851 1154 ntBASIC18.07■□□□□ 0.48
ASIC1P78348 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.07■□□□□ 0.48
ASIC1P78348 TIMM8BP1-201ENST00000452384 211 ntBASIC18.07■□□□□ 0.48
ASIC1P78348 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.07■□□□□ 0.48
ASIC1P78348 AC098859.1-201ENST00000502915 1238 ntBASIC18.07■□□□□ 0.48
ASIC1P78348 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.07■□□□□ 0.48
ASIC1P78348 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.07■□□□□ 0.48
ASIC1P78348 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.07■□□□□ 0.48
ASIC1P78348 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.07■□□□□ 0.48
ASIC1P78348 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.07■□□□□ 0.48
ASIC1P78348 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.07■□□□□ 0.48
ASIC1P78348 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ASIC1P78348 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
ASIC1P78348 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
ASIC1P78348 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.07■□□□□ 0.48
ASIC1P78348 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.07■□□□□ 0.48
ASIC1P78348 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ASIC1P78348 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ASIC1P78348 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.06■□□□□ 0.48
ASIC1P78348 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ASIC1P78348 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ASIC1P78348 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ASIC1P78348 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.06■□□□□ 0.48
ASIC1P78348 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.06■□□□□ 0.48
ASIC1P78348 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ASIC1P78348 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 AP005117.1-202ENST00000581724 1908 ntBASIC18.06■□□□□ 0.48
ASIC1P78348 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ASIC1P78348 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ASIC1P78348 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.06■□□□□ 0.48
ASIC1P78348 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.06■□□□□ 0.48
ASIC1P78348 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.06■□□□□ 0.48
ASIC1P78348 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ASIC1P78348 AC079140.1-201ENST00000508039 487 ntBASIC18.06■□□□□ 0.48
ASIC1P78348 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.06■□□□□ 0.48
ASIC1P78348 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.06■□□□□ 0.48
ASIC1P78348 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.06■□□□□ 0.48
ASIC1P78348 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.06■□□□□ 0.48
ASIC1P78348 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.06■□□□□ 0.48
ASIC1P78348 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.06■□□□□ 0.48
ASIC1P78348 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.06■□□□□ 0.48
ASIC1P78348 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
ASIC1P78348 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ASIC1P78348 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ASIC1P78348 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms