Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42P60953 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CDC42P60953 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDC42P60953 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.86□□□□□ -0.03
CDC42P60953 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.86□□□□□ -0.03
CDC42P60953 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 NUS1P2-201ENST00000417358 873 ntBASIC14.86□□□□□ -0.03
CDC42P60953 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.86□□□□□ -0.03
CDC42P60953 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42P60953 AP002383.4-201ENST00000442518 975 ntBASIC14.86□□□□□ -0.03
CDC42P60953 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42P60953 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42P60953 AL049597.2-201ENST00000565575 961 ntBASIC14.86□□□□□ -0.03
CDC42P60953 AC139887.3-201ENST00000568585 713 ntBASIC14.86□□□□□ -0.03
CDC42P60953 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.86□□□□□ -0.03
CDC42P60953 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDC42P60953 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.86□□□□□ -0.03
CDC42P60953 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CDC42P60953 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.86□□□□□ -0.03
CDC42P60953 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CDC42P60953 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42P60953 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDC42P60953 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.86□□□□□ -0.03
CDC42P60953 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42P60953 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
CDC42P60953 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42P60953 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42P60953 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDC42P60953 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC42P60953 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC42P60953 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CDC42P60953 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.85□□□□□ -0.03
CDC42P60953 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.85□□□□□ -0.03
CDC42P60953 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.85□□□□□ -0.03
CDC42P60953 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.85□□□□□ -0.03
CDC42P60953 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.85□□□□□ -0.03
CDC42P60953 SLC25A6P2-201ENST00000497974 877 ntBASIC14.85□□□□□ -0.03
CDC42P60953 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.85□□□□□ -0.03
CDC42P60953 KRT18P21-201ENST00000515767 1272 ntBASIC14.85□□□□□ -0.03
CDC42P60953 AP000867.3-201ENST00000524675 377 ntBASIC14.85□□□□□ -0.03
CDC42P60953 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC42P60953 AC012615.1-201ENST00000565797 1299 ntBASIC14.85□□□□□ -0.03
CDC42P60953 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 AC099336.1-202ENST00000602961 463 ntBASIC14.85□□□□□ -0.03
CDC42P60953 AP001269.4-201ENST00000609611 512 ntBASIC14.85□□□□□ -0.03
CDC42P60953 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.85□□□□□ -0.03
CDC42P60953 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC42P60953 AC138035.3-201ENST00000622706 2791 ntBASIC14.85□□□□□ -0.03
CDC42P60953 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDC42P60953 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC42P60953 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.85□□□□□ -0.03
CDC42P60953 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.85□□□□□ -0.03
CDC42P60953 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDC42P60953 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CDC42P60953 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42P60953 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CDC42P60953 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.84□□□□□ -0.03
CDC42P60953 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms