Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH15P55291 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 RN7SL606P-201ENST00000472779 293 ntBASIC15.18■□□□□ 0.02
CDH15P55291 STK19B-204ENST00000512515 211 ntBASIC15.18■□□□□ 0.02
CDH15P55291 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH15P55291 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH15P55291 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 AL160237.2-201ENST00000556165 472 ntBASIC15.18■□□□□ 0.02
CDH15P55291 AC011840.4-201ENST00000578471 627 ntBASIC15.18■□□□□ 0.02
CDH15P55291 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH15P55291 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDH15P55291 AC013467.2-201ENST00000605472 835 ntBASIC15.18■□□□□ 0.02
CDH15P55291 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH15P55291 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CDH15P55291 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CDH15P55291 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDH15P55291 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH15P55291 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH15P55291 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH15P55291 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH15P55291 SNX33P1-201ENST00000592116 1762 ntBASIC15.18■□□□□ 0.02
CDH15P55291 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 AL031731.1-201ENST00000642131 2094 ntBASIC15.18■□□□□ 0.02
CDH15P55291 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH15P55291 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CDH15P55291 AL365209.1-201ENST00000624418 6473 ntBASIC15.18■□□□□ 0.02
CDH15P55291 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH15P55291 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDH15P55291 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH15P55291 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CDH15P55291 IGHV3-47-201ENST00000425060 335 ntBASIC15.17■□□□□ 0.02
CDH15P55291 AC079781.3-201ENST00000449110 356 ntBASIC15.17■□□□□ 0.02
CDH15P55291 AC009078.2-202ENST00000463353 338 ntBASIC15.17■□□□□ 0.02
CDH15P55291 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.17■□□□□ 0.02
CDH15P55291 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.17■□□□□ 0.02
CDH15P55291 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CDH15P55291 AC104692.2-201ENST00000603054 253 ntBASIC15.17■□□□□ 0.02
CDH15P55291 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH15P55291 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.17■□□□□ 0.02
CDH15P55291 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH15P55291 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH15P55291 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDH15P55291 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 AC005912.2-201ENST00000619492 2400 ntBASIC15.17■□□□□ 0.02
CDH15P55291 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH15P55291 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH15P55291 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CDH15P55291 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CDH15P55291 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH15P55291 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.17■□□□□ 0.02
CDH15P55291 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH15P55291 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDH15P55291 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms