Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDH12P55289 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDH12P55289 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH12P55289 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH12P55289 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CDH12P55289 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH12P55289 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH12P55289 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 AC016027.1-202ENST00000607927 1699 ntBASIC15.13■□□□□ 0.01
CDH12P55289 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDH12P55289 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH12P55289 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH12P55289 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDH12P55289 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.13■□□□□ 0.01
CDH12P55289 AL450487.1-201ENST00000426799 995 ntBASIC15.13■□□□□ 0.01
CDH12P55289 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH12P55289 FAAHP1-202ENST00000446499 1238 ntBASIC15.13■□□□□ 0.01
CDH12P55289 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH12P55289 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH12P55289 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CDH12P55289 AC104692.2-201ENST00000603054 253 ntBASIC15.13■□□□□ 0.01
CDH12P55289 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDH12P55289 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CDH12P55289 AL773604.1-201ENST00000617417 272 ntBASIC15.13■□□□□ 0.01
CDH12P55289 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
CDH12P55289 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDH12P55289 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH12P55289 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH12P55289 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDH12P55289 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDH12P55289 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH12P55289 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH12P55289 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH12P55289 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CDH12P55289 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH12P55289 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CDH12P55289 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDH12P55289 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH12P55289 AL031284.1-201ENST00000419297 478 ntBASIC15.12■□□□□ 0.01
CDH12P55289 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH12P55289 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH12P55289 AC108751.1-201ENST00000490852 363 ntBASIC15.12■□□□□ 0.01
CDH12P55289 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 AP002469.2-201ENST00000531724 424 ntBASIC15.12■□□□□ 0.01
CDH12P55289 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CDH12P55289 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH12P55289 MIR4515-201ENST00000584082 81 ntBASIC15.12■□□□□ 0.01
CDH12P55289 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH12P55289 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH12P55289 MIR7706-201ENST00000613747 67 ntBASIC15.12■□□□□ 0.01
CDH12P55289 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDH12P55289 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH12P55289 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH12P55289 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH12P55289 AL161772.1-201ENST00000610494 4412 ntBASIC15.12■□□□□ 0.01
CDH12P55289 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH12P55289 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH12P55289 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH12P55289 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms