Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.19■□□□□ 0.5
EPHB4P54760 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
EPHB4P54760 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.19■□□□□ 0.5
EPHB4P54760 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
EPHB4P54760 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.19■□□□□ 0.5
EPHB4P54760 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
EPHB4P54760 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.19■□□□□ 0.5
EPHB4P54760 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.19■□□□□ 0.5
EPHB4P54760 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
EPHB4P54760 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.19■□□□□ 0.5
EPHB4P54760 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.19■□□□□ 0.5
EPHB4P54760 AL512343.1-201ENST00000605837 169 ntBASIC18.19■□□□□ 0.5
EPHB4P54760 RN7SL828P-201ENST00000607615 303 ntBASIC18.19■□□□□ 0.5
EPHB4P54760 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.19■□□□□ 0.5
EPHB4P54760 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.19■□□□□ 0.5
EPHB4P54760 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.19■□□□□ 0.5
EPHB4P54760 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
EPHB4P54760 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
EPHB4P54760 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.18■□□□□ 0.5
EPHB4P54760 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.18■□□□□ 0.5
EPHB4P54760 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 AL513523.2-202ENST00000427283 2040 ntBASIC18.18■□□□□ 0.5
EPHB4P54760 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
EPHB4P54760 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.18■□□□□ 0.5
EPHB4P54760 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.18■□□□□ 0.5
EPHB4P54760 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
EPHB4P54760 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 SPDYE19P-201ENST00000338590 713 ntBASIC18.18■□□□□ 0.5
EPHB4P54760 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.18■□□□□ 0.5
EPHB4P54760 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.18■□□□□ 0.5
EPHB4P54760 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.18■□□□□ 0.5
EPHB4P54760 AC011495.1-201ENST00000498085 584 ntBASIC18.18■□□□□ 0.5
EPHB4P54760 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
EPHB4P54760 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.18■□□□□ 0.5
EPHB4P54760 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.18■□□□□ 0.5
EPHB4P54760 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.18■□□□□ 0.5
EPHB4P54760 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.18■□□□□ 0.5
EPHB4P54760 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.18■□□□□ 0.5
EPHB4P54760 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.18■□□□□ 0.5
EPHB4P54760 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.18■□□□□ 0.5
EPHB4P54760 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
EPHB4P54760 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
EPHB4P54760 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
EPHB4P54760 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.18■□□□□ 0.5
EPHB4P54760 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EPHB4P54760 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
EPHB4P54760 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
EPHB4P54760 TOP3BP1-201ENST00000420768 1380 ntBASIC18.17■□□□□ 0.5
EPHB4P54760 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
EPHB4P54760 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EPHB4P54760 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
EPHB4P54760 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.17■□□□□ 0.5
EPHB4P54760 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EPHB4P54760 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
EPHB4P54760 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
EPHB4P54760 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
EPHB4P54760 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.17■□□□□ 0.5
EPHB4P54760 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
EPHB4P54760 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
EPHB4P54760 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
EPHB4P54760 AC087499.6-201ENST00000411576 835 ntBASIC18.17■□□□□ 0.5
EPHB4P54760 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.17■□□□□ 0.5
EPHB4P54760 RN7SL837P-201ENST00000463010 287 ntBASIC18.17■□□□□ 0.5
EPHB4P54760 SPDYE18-201ENST00000510091 1050 ntBASIC18.17■□□□□ 0.5
EPHB4P54760 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.17■□□□□ 0.5
EPHB4P54760 MIR4525-201ENST00000580000 75 ntBASIC18.17■□□□□ 0.5
EPHB4P54760 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EPHB4P54760 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
EPHB4P54760 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.17■□□□□ 0.5
EPHB4P54760 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EPHB4P54760 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.17■□□□□ 0.5
EPHB4P54760 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
EPHB4P54760 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.17■□□□□ 0.5
EPHB4P54760 AC092171.3-201ENST00000610122 2651 ntBASIC18.17■□□□□ 0.5
EPHB4P54760 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
EPHB4P54760 AC007950.2-201ENST00000615045 2347 ntBASIC18.17■□□□□ 0.5
EPHB4P54760 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
EPHB4P54760 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EPHB4P54760 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms