Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK1P53667 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK1P53667 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
LIMK1P53667 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK1P53667 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.94■□□□□ 0.14
LIMK1P53667 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LIMK1P53667 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.94■□□□□ 0.14
LIMK1P53667 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.94■□□□□ 0.14
LIMK1P53667 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK1P53667 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK1P53667 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK1P53667 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK1P53667 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.94■□□□□ 0.14
LIMK1P53667 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.94■□□□□ 0.14
LIMK1P53667 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIMK1P53667 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LIMK1P53667 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.93■□□□□ 0.14
LIMK1P53667 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LIMK1P53667 LINC02199-201ENST00000506655 2702 ntBASIC15.93■□□□□ 0.14
LIMK1P53667 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
LIMK1P53667 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.93■□□□□ 0.14
LIMK1P53667 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.93■□□□□ 0.14
LIMK1P53667 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.93■□□□□ 0.14
LIMK1P53667 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.93■□□□□ 0.14
LIMK1P53667 CSF2RBP1-201ENST00000447905 391 ntBASIC15.93■□□□□ 0.14
LIMK1P53667 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.93■□□□□ 0.14
LIMK1P53667 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.93■□□□□ 0.14
LIMK1P53667 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
LIMK1P53667 SLC25A47P1-201ENST00000531577 414 ntBASIC15.93■□□□□ 0.14
LIMK1P53667 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 RHOQP1-201ENST00000555758 579 ntBASIC15.93■□□□□ 0.14
LIMK1P53667 RARRES2P5-201ENST00000564013 466 ntBASIC15.93■□□□□ 0.14
LIMK1P53667 AC024267.1-201ENST00000582320 895 ntBASIC15.93■□□□□ 0.14
LIMK1P53667 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.93■□□□□ 0.14
LIMK1P53667 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.93■□□□□ 0.14
LIMK1P53667 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.93■□□□□ 0.14
LIMK1P53667 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LIMK1P53667 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
LIMK1P53667 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LIMK1P53667 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LIMK1P53667 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.93■□□□□ 0.14
LIMK1P53667 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK1P53667 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LIMK1P53667 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.92■□□□□ 0.14
LIMK1P53667 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LIMK1P53667 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LIMK1P53667 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.92■□□□□ 0.14
LIMK1P53667 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 MIR1247-201ENST00000408206 136 ntBASIC15.92■□□□□ 0.14
LIMK1P53667 GPAA1P2-201ENST00000417923 928 ntBASIC15.92■□□□□ 0.14
LIMK1P53667 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.92■□□□□ 0.14
LIMK1P53667 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.92■□□□□ 0.14
LIMK1P53667 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.92■□□□□ 0.14
LIMK1P53667 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.92■□□□□ 0.14
LIMK1P53667 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.92■□□□□ 0.14
LIMK1P53667 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.92■□□□□ 0.14
LIMK1P53667 MIR3615-201ENST00000581999 87 ntBASIC15.92■□□□□ 0.14
LIMK1P53667 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.92■□□□□ 0.14
LIMK1P53667 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.92■□□□□ 0.14
LIMK1P53667 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.92■□□□□ 0.14
LIMK1P53667 AL022328.1-201ENST00000610050 478 ntBASIC15.92■□□□□ 0.14
LIMK1P53667 RPSAP52-203ENST00000622976 1023 ntBASIC15.92■□□□□ 0.14
LIMK1P53667 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LIMK1P53667 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK1P53667 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
LIMK1P53667 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
LIMK1P53667 PCDHB17P-201ENST00000539533 2393 ntBASIC15.92■□□□□ 0.14
LIMK1P53667 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms