Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP98P52948 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NUP98P52948 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP98P52948 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP98P52948 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP98P52948 AC093813.1-201ENST00000605066 256 ntBASIC19.79■□□□□ 0.76
NUP98P52948 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.78■□□□□ 0.76
NUP98P52948 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.78■□□□□ 0.76
NUP98P52948 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.78■□□□□ 0.76
NUP98P52948 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NUP98P52948 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.78■□□□□ 0.76
NUP98P52948 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.78■□□□□ 0.76
NUP98P52948 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NUP98P52948 CNN2P8-201ENST00000421872 913 ntBASIC19.78■□□□□ 0.76
NUP98P52948 AC016694.1-201ENST00000434179 700 ntBASIC19.78■□□□□ 0.76
NUP98P52948 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.78■□□□□ 0.76
NUP98P52948 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.78■□□□□ 0.76
NUP98P52948 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.78■□□□□ 0.76
NUP98P52948 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.78■□□□□ 0.76
NUP98P52948 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.78■□□□□ 0.76
NUP98P52948 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.78■□□□□ 0.76
NUP98P52948 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NUP98P52948 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP98P52948 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.78■□□□□ 0.76
NUP98P52948 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUP98P52948 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.77■□□□□ 0.76
NUP98P52948 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP98P52948 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUP98P52948 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.77■□□□□ 0.76
NUP98P52948 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.77■□□□□ 0.76
NUP98P52948 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP98P52948 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP98P52948 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP98P52948 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.77■□□□□ 0.76
NUP98P52948 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.77■□□□□ 0.76
NUP98P52948 AC099548.2-209ENST00000480264 625 ntBASIC19.77■□□□□ 0.76
NUP98P52948 ENPP7P5-201ENST00000541031 1031 ntBASIC19.77■□□□□ 0.76
NUP98P52948 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.77■□□□□ 0.76
NUP98P52948 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP98P52948 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUP98P52948 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NUP98P52948 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUP98P52948 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP98P52948 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP98P52948 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NUP98P52948 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.77■□□□□ 0.75
NUP98P52948 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NUP98P52948 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.75
NUP98P52948 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
NUP98P52948 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
NUP98P52948 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.77■□□□□ 0.75
NUP98P52948 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
NUP98P52948 AC134312.5-201ENST00000568031 1313 ntBASIC19.76■□□□□ 0.75
NUP98P52948 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP98P52948 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUP98P52948 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.76■□□□□ 0.75
NUP98P52948 FO681548.1-201ENST00000455617 1132 ntBASIC19.76■□□□□ 0.75
NUP98P52948 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.76■□□□□ 0.75
NUP98P52948 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.76■□□□□ 0.75
NUP98P52948 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.76■□□□□ 0.75
NUP98P52948 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP98P52948 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
NUP98P52948 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
NUP98P52948 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NUP98P52948 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
NUP98P52948 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.76■□□□□ 0.75
NUP98P52948 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP98P52948 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.76■□□□□ 0.75
NUP98P52948 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
NUP98P52948 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.76■□□□□ 0.75
NUP98P52948 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
NUP98P52948 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP98P52948 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NUP98P52948 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NUP98P52948 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP98P52948 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.76■□□□□ 0.75
NUP98P52948 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUP98P52948 MIR1247-201ENST00000408206 136 ntBASIC19.76■□□□□ 0.75
NUP98P52948 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
NUP98P52948 ZNF767P-206ENST00000513792 565 ntBASIC19.76■□□□□ 0.75
NUP98P52948 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.76■□□□□ 0.75
NUP98P52948 AP000812.2-201ENST00000538934 718 ntBASIC19.76■□□□□ 0.75
NUP98P52948 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
NUP98P52948 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.76■□□□□ 0.75
NUP98P52948 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.76■□□□□ 0.75
NUP98P52948 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.76■□□□□ 0.75
NUP98P52948 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms